FHIR Osiris Implementation Guide
1.1.0 - trial-implementation
FHIR Osiris Implementation Guide
1.1.0 - trial-implementation
This page is part of the OSIRIS FHIR Implementation Guide (v1.1.0: Release) based on FHIR (HL7® FHIR® Standard) R4. This is the current published version. For a full list of available versions, see the Directory of published versions
| Draft as of 2025-04-03 |
{
"resourceType" : "ValueSet",
"id" : "PlatformName",
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: ValueSet PlatformName</b></p><a name=\"PlatformName\"> </a><a name=\"hcPlatformName\"> </a><a name=\"PlatformName-en-US\"> </a><p>Ce jeu de valeur (ValueSet) inclut les codes selon les règles suivantes :</p><ul><li>Include ces codes sont définis dans <code>https://github.com/siric-osiris/OSIRIS</code><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td>O7-1</td><td>Affymetrix Cytoscan HD</td></tr><tr><td>O7-2</td><td>Affymetrix EMET Plus Premier Pack</td></tr><tr><td>O7-3</td><td>Affymetrix Genome-Wide Human SNP Array 5.0</td></tr><tr><td>O7-4</td><td>Affymetrix Genome-Wide Human SNP Array 6.0</td></tr><tr><td>O7-5</td><td>Affymetrix HT Human Genome U133A Array Plate Set</td></tr><tr><td>O7-6</td><td>Affymetrix Human Exon 1.0 ST</td></tr><tr><td>O7-7</td><td>Affymetrix Human Gene 1.0 ST</td></tr><tr><td>O7-8</td><td>Affymetrix Human Genome U219 Array Plate</td></tr><tr><td>O7-9</td><td>Affymetrix Human MIP 330K</td></tr><tr><td>O7-10</td><td>Affymetrix Human U133 Plus 2.0</td></tr><tr><td>O7-11</td><td>Affymetrix Human U133 Plus PM</td></tr><tr><td>O7-12</td><td>Affymetrix Mapping 100K Array Set</td></tr><tr><td>O7-13</td><td>Affymetrix Mapping 10K 2.0 Array Set</td></tr><tr><td>O7-14</td><td>Affymetrix Mapping 500K Array Set</td></tr><tr><td>O7-15</td><td>Affymetrix OncoScan FFPE Express 2.0</td></tr><tr><td>O7-16</td><td>Agilent 244K Custom Gene Expression G4502A-07</td></tr><tr><td>O7-17</td><td>Agilent 244K Custom Gene Expression G4502A-07-1</td></tr><tr><td>O7-18</td><td>Agilent 244K Custom Gene Expression G4502A-07-2</td></tr><tr><td>O7-19</td><td>Agilent 244K Custom Gene Expression G4502A-07-3</td></tr><tr><td>O7-20</td><td>Agilent 8 x 15K Human miRNA-specific microarray</td></tr><tr><td>O7-21</td><td>Agilent Human CGH 1x1M</td></tr><tr><td>O7-22</td><td>Agilent Human CGH 2x400K</td></tr><tr><td>O7-23</td><td>Agilent Human CGH 4x180K</td></tr><tr><td>O7-24</td><td>Agilent Human CGH 8x60K</td></tr><tr><td>O7-25</td><td>Agilent Human CNV 2x400K</td></tr><tr><td>O7-26</td><td>Agilent Human CNV Association 2x105K</td></tr><tr><td>O7-27</td><td>Agilent Human CpG Island Microarray Kit</td></tr><tr><td>O7-28</td><td>Agilent Human Genome 105A</td></tr><tr><td>O7-29</td><td>Agilent Human Genome 244A</td></tr><tr><td>O7-30</td><td>Agilent Human Genome 44K</td></tr><tr><td>O7-31</td><td>Agilent Human Genome CGH Custom Microaary 2x415K</td></tr><tr><td>O7-32</td><td>Agilent Human miRNA Microarray Kit (v2)</td></tr><tr><td>O7-33</td><td>Agilent Human Promoter ChIP-on-chip Microarray Set</td></tr><tr><td>O7-34</td><td>Agilent Human SpliceArray</td></tr><tr><td>O7-35</td><td>Agilent Whole Human Genome Oligo Microarray Kit</td></tr><tr><td>O7-36</td><td>Almac Human CRC</td></tr><tr><td>O7-37</td><td>capillary sequencing</td></tr><tr><td>O7-38</td><td>Complete Genomics</td></tr><tr><td>O7-39</td><td>Custom-designed cDNA array</td></tr><tr><td>O7-40</td><td>Custom-designed gene expression array</td></tr><tr><td>O7-41</td><td>Helicos sequencing</td></tr><tr><td>O7-42</td><td>HumanOmni2.5-8 BeadChip Kit</td></tr><tr><td>O7-43</td><td>Illumina GA sequencing</td></tr><tr><td>O7-44</td><td>Illumina goldengate methylation</td></tr><tr><td>O7-45</td><td>Illumina GoldenGate Methylation Cancer Panel I</td></tr><tr><td>O7-46</td><td>Illumina HiSeq</td></tr><tr><td>O7-47</td><td>Illumina HiSeq X Ten</td></tr><tr><td>O7-48</td><td>Illumina Human Omni1-Quad beadchip</td></tr><tr><td>O7-49</td><td>Illumina Human1M OmniQuad chip</td></tr><tr><td>O7-50</td><td>Illumina human1m-duo</td></tr><tr><td>O7-51</td><td>Illumina human510s-duo</td></tr><tr><td>O7-52</td><td>Illumina human660w-quad</td></tr><tr><td>O7-53</td><td>Illumina HumanCNV370-Duo v1.0 BeadChip</td></tr><tr><td>O7-54</td><td>Illumina humancytosnp-12</td></tr><tr><td>O7-55</td><td>Illumina HumanHap550</td></tr><tr><td>O7-56</td><td>Illumina HumanHT-12 v4.0 beadchip</td></tr><tr><td>O7-57</td><td>Illumina humanht-16</td></tr><tr><td>O7-58</td><td>Illumina humanht-17</td></tr><tr><td>O7-59</td><td>Illumina humanmethylation27</td></tr><tr><td>O7-60</td><td>Illumina HumanOmniExpress BeadChip</td></tr><tr><td>O7-61</td><td>Illumina HumanRef-8 v3.0 beadchip</td></tr><tr><td>O7-62</td><td>Illumina HumanWG-6 v3.0 beadchip</td></tr><tr><td>O7-63</td><td>Illumina Infinium HumanMethylation450</td></tr><tr><td>O7-64</td><td>Illumina microRNA Expression Profiling Panel</td></tr><tr><td>O7-65</td><td>Illumina MiSeq Personal Sequencer</td></tr><tr><td>O7-66</td><td>Ion Torrent PGM</td></tr><tr><td>O7-67</td><td>Ion Torrent Proton</td></tr><tr><td>O7-68</td><td>M.D. Anderson Reverse Phase Protein Array Core</td></tr><tr><td>O7-69</td><td>Microsatellite Instability Analysis</td></tr><tr><td>O7-70</td><td>nanoString</td></tr><tr><td>O7-71</td><td>Nimblegen CGS</td></tr><tr><td>O7-72</td><td>Nimblegen Gene Expression 12x135K</td></tr><tr><td>O7-73</td><td>Nimblegen Gene Expression 385K</td></tr><tr><td>O7-74</td><td>Nimblegen Gene Expression 4x72K</td></tr><tr><td>O7-75</td><td>Nimblegen Human CGH 2.1M Whole-Genome v2.0D Array</td></tr><tr><td>O7-76</td><td>Nimblegen Human CGH 3x720 Whole-Genome v3.0 Array</td></tr><tr><td>O7-77</td><td>Nimblegen Human Methylation 2.1M Whole-Genome sets</td></tr><tr><td>O7-78</td><td>Nimblegen Human Methylation 385K Whole-Genome sets</td></tr><tr><td>O7-79</td><td>PacBio RS sequencing</td></tr><tr><td>O7-80</td><td>PCR</td></tr><tr><td>O7-81</td><td>PCR and capillary sequencing</td></tr><tr><td>O7-82</td><td>qPCR</td></tr><tr><td>O7-83</td><td>Roche 454 sequencing</td></tr><tr><td>O7-84</td><td>Sequenom MassARRAY</td></tr><tr><td>O7-85</td><td>SOLiD sequencing</td></tr><tr><td>O7-86</td><td>Digital PCR</td></tr><tr><td>O7-87</td><td>NextSeq 500</td></tr><tr><td>O7-88</td><td>NovaSeq</td></tr><tr><td>O7-OTH</td><td>Other</td></tr></table></li><li>Include ces codes sont définis dans <a href=\"http://terminology.hl7.org/6.2.0/CodeSystem-umls.html\"><code>http://terminology.hl7.org/CodeSystem/umls</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td>C0439673</td><td>Unknown</td></tr></table></li></ul></div>"
},
"url" : "https://ig-osiris.cancer.fr/ig/osiris/ValueSet/PlatformName",
"version" : "1.1.0",
"name" : "PlatformName",
"title" : "Platform Name",
"status" : "draft",
"date" : "2025-04-03T15:16:31+02:00",
"publisher" : "institutcancer",
"contact" : [
{
"name" : "institutcancer",
"telecom" : [
{
"system" : "url",
"value" : "http://cancer.fr"
},
{
"system" : "email",
"value" : "osiris@institutcancer.fr"
}
]
},
{
"name" : "Aurélien JOBARD",
"telecom" : [
{
"system" : "email",
"value" : "osiris@institutcancer.fr"
}
]
}
],
"description" : "Platform Name",
"compose" : {
"include" : [
{
"system" : "https://github.com/siric-osiris/OSIRIS",
"concept" : [
{
"code" : "O7-1",
"display" : "Affymetrix Cytoscan HD"
},
{
"code" : "O7-2",
"display" : "Affymetrix EMET Plus Premier Pack"
},
{
"code" : "O7-3",
"display" : "Affymetrix Genome-Wide Human SNP Array 5.0"
},
{
"code" : "O7-4",
"display" : "Affymetrix Genome-Wide Human SNP Array 6.0"
},
{
"code" : "O7-5",
"display" : "Affymetrix HT Human Genome U133A Array Plate Set"
},
{
"code" : "O7-6",
"display" : "Affymetrix Human Exon 1.0 ST"
},
{
"code" : "O7-7",
"display" : "Affymetrix Human Gene 1.0 ST"
},
{
"code" : "O7-8",
"display" : "Affymetrix Human Genome U219 Array Plate"
},
{
"code" : "O7-9",
"display" : "Affymetrix Human MIP 330K"
},
{
"code" : "O7-10",
"display" : "Affymetrix Human U133 Plus 2.0"
},
{
"code" : "O7-11",
"display" : "Affymetrix Human U133 Plus PM"
},
{
"code" : "O7-12",
"display" : "Affymetrix Mapping 100K Array Set"
},
{
"code" : "O7-13",
"display" : "Affymetrix Mapping 10K 2.0 Array Set"
},
{
"code" : "O7-14",
"display" : "Affymetrix Mapping 500K Array Set"
},
{
"code" : "O7-15",
"display" : "Affymetrix OncoScan FFPE Express 2.0"
},
{
"code" : "O7-16",
"display" : "Agilent 244K Custom Gene Expression G4502A-07"
},
{
"code" : "O7-17",
"display" : "Agilent 244K Custom Gene Expression G4502A-07-1"
},
{
"code" : "O7-18",
"display" : "Agilent 244K Custom Gene Expression G4502A-07-2"
},
{
"code" : "O7-19",
"display" : "Agilent 244K Custom Gene Expression G4502A-07-3"
},
{
"code" : "O7-20",
"display" : "Agilent 8 x 15K Human miRNA-specific microarray"
},
{
"code" : "O7-21",
"display" : "Agilent Human CGH 1x1M"
},
{
"code" : "O7-22",
"display" : "Agilent Human CGH 2x400K"
},
{
"code" : "O7-23",
"display" : "Agilent Human CGH 4x180K"
},
{
"code" : "O7-24",
"display" : "Agilent Human CGH 8x60K"
},
{
"code" : "O7-25",
"display" : "Agilent Human CNV 2x400K"
},
{
"code" : "O7-26",
"display" : "Agilent Human CNV Association 2x105K"
},
{
"code" : "O7-27",
"display" : "Agilent Human CpG Island Microarray Kit"
},
{
"code" : "O7-28",
"display" : "Agilent Human Genome 105A"
},
{
"code" : "O7-29",
"display" : "Agilent Human Genome 244A"
},
{
"code" : "O7-30",
"display" : "Agilent Human Genome 44K"
},
{
"code" : "O7-31",
"display" : "Agilent Human Genome CGH Custom Microaary 2x415K"
},
{
"code" : "O7-32",
"display" : "Agilent Human miRNA Microarray Kit (v2)"
},
{
"code" : "O7-33",
"display" : "Agilent Human Promoter ChIP-on-chip Microarray Set"
},
{
"code" : "O7-34",
"display" : "Agilent Human SpliceArray"
},
{
"code" : "O7-35",
"display" : "Agilent Whole Human Genome Oligo Microarray Kit"
},
{
"code" : "O7-36",
"display" : "Almac Human CRC"
},
{
"code" : "O7-37",
"display" : "capillary sequencing"
},
{
"code" : "O7-38",
"display" : "Complete Genomics"
},
{
"code" : "O7-39",
"display" : "Custom-designed cDNA array"
},
{
"code" : "O7-40",
"display" : "Custom-designed gene expression array"
},
{
"code" : "O7-41",
"display" : "Helicos sequencing"
},
{
"code" : "O7-42",
"display" : "HumanOmni2.5-8 BeadChip Kit"
},
{
"code" : "O7-43",
"display" : "Illumina GA sequencing"
},
{
"code" : "O7-44",
"display" : "Illumina goldengate methylation"
},
{
"code" : "O7-45",
"display" : "Illumina GoldenGate Methylation Cancer Panel I"
},
{
"code" : "O7-46",
"display" : "Illumina HiSeq"
},
{
"code" : "O7-47",
"display" : "Illumina HiSeq X Ten"
},
{
"code" : "O7-48",
"display" : "Illumina Human Omni1-Quad beadchip"
},
{
"code" : "O7-49",
"display" : "Illumina Human1M OmniQuad chip"
},
{
"code" : "O7-50",
"display" : "Illumina human1m-duo"
},
{
"code" : "O7-51",
"display" : "Illumina human510s-duo"
},
{
"code" : "O7-52",
"display" : "Illumina human660w-quad"
},
{
"code" : "O7-53",
"display" : "Illumina HumanCNV370-Duo v1.0 BeadChip"
},
{
"code" : "O7-54",
"display" : "Illumina humancytosnp-12"
},
{
"code" : "O7-55",
"display" : "Illumina HumanHap550"
},
{
"code" : "O7-56",
"display" : "Illumina HumanHT-12 v4.0 beadchip"
},
{
"code" : "O7-57",
"display" : "Illumina humanht-16"
},
{
"code" : "O7-58",
"display" : "Illumina humanht-17"
},
{
"code" : "O7-59",
"display" : "Illumina humanmethylation27"
},
{
"code" : "O7-60",
"display" : "Illumina HumanOmniExpress BeadChip"
},
{
"code" : "O7-61",
"display" : "Illumina HumanRef-8 v3.0 beadchip"
},
{
"code" : "O7-62",
"display" : "Illumina HumanWG-6 v3.0 beadchip"
},
{
"code" : "O7-63",
"display" : "Illumina Infinium HumanMethylation450"
},
{
"code" : "O7-64",
"display" : "Illumina microRNA Expression Profiling Panel"
},
{
"code" : "O7-65",
"display" : "Illumina MiSeq Personal Sequencer"
},
{
"code" : "O7-66",
"display" : "Ion Torrent PGM"
},
{
"code" : "O7-67",
"display" : "Ion Torrent Proton"
},
{
"code" : "O7-68",
"display" : "M.D. Anderson Reverse Phase Protein Array Core"
},
{
"code" : "O7-69",
"display" : "Microsatellite Instability Analysis"
},
{
"code" : "O7-70",
"display" : "nanoString"
},
{
"code" : "O7-71",
"display" : "Nimblegen CGS"
},
{
"code" : "O7-72",
"display" : "Nimblegen Gene Expression 12x135K"
},
{
"code" : "O7-73",
"display" : "Nimblegen Gene Expression 385K"
},
{
"code" : "O7-74",
"display" : "Nimblegen Gene Expression 4x72K"
},
{
"code" : "O7-75",
"display" : "Nimblegen Human CGH 2.1M Whole-Genome v2.0D Array"
},
{
"code" : "O7-76",
"display" : "Nimblegen Human CGH 3x720 Whole-Genome v3.0 Array"
},
{
"code" : "O7-77",
"display" : "Nimblegen Human Methylation 2.1M Whole-Genome sets"
},
{
"code" : "O7-78",
"display" : "Nimblegen Human Methylation 385K Whole-Genome sets"
},
{
"code" : "O7-79",
"display" : "PacBio RS sequencing"
},
{
"code" : "O7-80",
"display" : "PCR"
},
{
"code" : "O7-81",
"display" : "PCR and capillary sequencing"
},
{
"code" : "O7-82",
"display" : "qPCR"
},
{
"code" : "O7-83",
"display" : "Roche 454 sequencing"
},
{
"code" : "O7-84",
"display" : "Sequenom MassARRAY"
},
{
"code" : "O7-85",
"display" : "SOLiD sequencing"
},
{
"code" : "O7-86",
"display" : "Digital PCR"
},
{
"code" : "O7-87",
"display" : "NextSeq 500"
},
{
"code" : "O7-88",
"display" : "NovaSeq"
},
{
"code" : "O7-OTH",
"display" : "Other"
}
]
},
{
"system" : "http://terminology.hl7.org/CodeSystem/umls",
"concept" : [
{
"code" : "C0439673",
"display" : "Unknown"
}
]
}
]
}
}