This page is part of the OSIRIS FHIR Implementation Guide (v1.1.0: Release) based on FHIR (HL7® FHIR® Standard) R4. This is the current published version. For a full list of available versions, see the Directory of published versions

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: fhir-osiris-example-biologicalsample-2 - TTL Representation

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@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

 a fhir:Specimen ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:id [ fhir:v "fhir-osiris-example-biologicalsample-2"] ; # 
  fhir:meta [
    ( fhir:profile [
fhir:v "https://ig-osiris.cancer.fr/ig/osiris/StructureDefinition/onco-biological-sample"^^xsd:anyURI ;
fhir:link <https://ig-osiris.cancer.fr/ig/osiris/StructureDefinition/onco-biological-sample>     ] )
  ] ; # 
  fhir:text [
fhir:status [ fhir:v "extensions" ] ;
fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: Specimen fhir-osiris-example-biologicalsample-2</b></p><a name=\"fhir-osiris-example-biologicalsample-2\"> </a><a name=\"hcfhir-osiris-example-biologicalsample-2\"> </a><a name=\"fhir-osiris-example-biologicalsample-2-en-US\"> </a><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\"/><p style=\"margin-bottom: 0px\">Profil: <a href=\"StructureDefinition-onco-biological-sample.html\">Biological Sample</a></p></div><p><b>Biological Sample Origin</b>: <span title=\"Codes:{https://terminology.arkhn.com/osiris O59-2}\">Origin of the sample</span></p><p><b>Based On Condition (Tumor Pathology Event)</b>: <a href=\"Condition-fhir-osiris-example-TumorPathologyEvent-instance-1.html\">Condition C0677930</a></p><p><b>identifier</b>: ech 2</p><p><b>type</b>: <span title=\"Codes:{http://terminology.hl7.org/CodeSystem/umls C1519524}\">C1519524</span></p><p><b>subject</b>: <a href=\"Patient-L304.html\">Patient Anonyme Male, Date de Naissance :1967-11-08</a></p><p><b>parent</b>: <a href=\"Specimen-fhir-osiris-example-biologicalsample-1.html\">Specimen : extension = Tumoral,-&gt;Condition C0677930; identifier = ech primary; type = C4039816; condition = Tissue Frozen</a></p><h3>Collections</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Collected[x]</b></td><td><b>Quantity</b></td><td><b>BodySite</b></td></tr><tr><td style=\"display: none\">*</td><td>2011-02-08</td><td>60 %<span style=\"background: LightGoldenRodYellow\"> (Details: [not stated]  codeC4055283 = 'C4055283')</span></td><td><span title=\"Codes:{http://terminology.hl7.org/CodeSystem/icd-o-3 C30}\">C30</span></td></tr></table><p><b>condition</b>: <span title=\"Codes:\">Storage temperature of the sample.</span></p></div>"^^rdf:XMLLiteral
  ] ; # 
  fhir:extension ( [
fhir:url [ fhir:v "https://ig-osiris.cancer.fr/ig/osiris/StructureDefinition/BiologicalSampleOrigin"^^xsd:anyURI ] ;
fhir:value [
a fhir:CodeableConcept ;
      ( fhir:coding [
fhir:system [ fhir:v "https://terminology.arkhn.com/osiris"^^xsd:anyURI ] ;
fhir:code [ fhir:v "O59-2" ]       ] ) ;
fhir:text [ fhir:v "Origin of the sample" ]     ]
  ] [
fhir:url [ fhir:v "https://ig-osiris.cancer.fr/ig/osiris/StructureDefinition/BasedOnCondition"^^xsd:anyURI ] ;
fhir:value [
a fhir:Reference ;
fhir:reference [ fhir:v "Condition/fhir-osiris-example-TumorPathologyEvent-instance-1" ]     ]
  ] ) ; # 
  fhir:identifier ( [
fhir:value [ fhir:v "ech 2" ]
  ] ) ; # 
  fhir:type [
    ( fhir:coding [
fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/umls"^^xsd:anyURI ] ;
fhir:code [ fhir:v "C1519524" ]     ] )
  ] ; # 
  fhir:subject [
fhir:reference [ fhir:v "Patient/L304" ]
  ] ; # 
  fhir:parent ( [
fhir:reference [ fhir:v "Specimen/fhir-osiris-example-biologicalsample-1" ]
  ] ) ; # 
  fhir:collection [
fhir:collected [
a fhir:dateTime ;
fhir:v "2011-02-08"^^xsd:date     ] ;
fhir:quantity [
fhir:value [ fhir:v "60"^^xsd:decimal ] ;
fhir:unit [ fhir:v "%" ] ;
fhir:code [ fhir:v "C4055283" ]     ] ;
fhir:bodySite [
      ( fhir:coding [
fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/icd-o-3"^^xsd:anyURI ] ;
fhir:code [ fhir:v "C30" ]       ] )     ]
  ] ; # 
  fhir:condition ( [
    ( fhir:coding [
fhir:code [ fhir:v "FFPE" ]     ] ) ;
fhir:text [ fhir:v "Storage temperature of the sample." ]
  ] ) . #