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FHIR Osiris Implementation Guide
1.1.0 - trial-implementation

This page is part of the OSIRIS FHIR Implementation Guide (v1.1.0: Release) based on FHIR (HL7® FHIR® Standard) R4. This is the current published version. For a full list of available versions, see the Directory of published versions

: fhir-osiris-example-biologicalsample-2 - JSON Representation

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{
  "resourceType" : "Specimen",
  "id" : "fhir-osiris-example-biologicalsample-2",
  "meta" : {
    "profile" : [
      🔗 "https://ig-osiris.cancer.fr/ig/osiris/StructureDefinition/onco-biological-sample"
    ]
  },
  "text" : {
    "status" : "extensions",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: Specimen fhir-osiris-example-biologicalsample-2</b></p><a name=\"fhir-osiris-example-biologicalsample-2\"> </a><a name=\"hcfhir-osiris-example-biologicalsample-2\"> </a><a name=\"fhir-osiris-example-biologicalsample-2-en-US\"> </a><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\"/><p style=\"margin-bottom: 0px\">Profil: <a href=\"StructureDefinition-onco-biological-sample.html\">Biological Sample</a></p></div><p><b>Biological Sample Origin</b>: <span title=\"Codes:{https://terminology.arkhn.com/osiris O59-2}\">Origin of the sample</span></p><p><b>Based On Condition (Tumor Pathology Event)</b>: <a href=\"Condition-fhir-osiris-example-TumorPathologyEvent-instance-1.html\">Condition C0677930</a></p><p><b>identifier</b>: ech 2</p><p><b>type</b>: <span title=\"Codes:{http://terminology.hl7.org/CodeSystem/umls C1519524}\">C1519524</span></p><p><b>subject</b>: <a href=\"Patient-L304.html\">Patient Anonyme Male, Date de Naissance :1967-11-08</a></p><p><b>parent</b>: <a href=\"Specimen-fhir-osiris-example-biologicalsample-1.html\">Specimen : extension = Tumoral,-&gt;Condition C0677930; identifier = ech primary; type = C4039816; condition = Tissue Frozen</a></p><h3>Collections</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Collected[x]</b></td><td><b>Quantity</b></td><td><b>BodySite</b></td></tr><tr><td style=\"display: none\">*</td><td>2011-02-08</td><td>60 %<span style=\"background: LightGoldenRodYellow\"> (Details: [not stated]  codeC4055283 = 'C4055283')</span></td><td><span title=\"Codes:{http://terminology.hl7.org/CodeSystem/icd-o-3 C30}\">C30</span></td></tr></table><p><b>condition</b>: <span title=\"Codes:\">Storage temperature of the sample.</span></p></div>"
  },
  "extension" : [
    {
      "url" : "https://ig-osiris.cancer.fr/ig/osiris/StructureDefinition/BiologicalSampleOrigin",
      "valueCodeableConcept" : {
        "coding" : [
          {
            "system" : "https://terminology.arkhn.com/osiris",
            "code" : "O59-2"
          }
        ],
        "text" : "Origin of the sample"
      }
    },
    {
      "url" : "https://ig-osiris.cancer.fr/ig/osiris/StructureDefinition/BasedOnCondition",
      "valueReference" : {
        🔗 "reference" : "Condition/fhir-osiris-example-TumorPathologyEvent-instance-1"
      }
    }
  ],
  "identifier" : [
    {
      "value" : "ech 2"
    }
  ],
  "type" : {
    "coding" : [
      {
        "system" : "http://terminology.hl7.org/CodeSystem/umls",
        "code" : "C1519524"
      }
    ]
  },
  "subject" : {
    🔗 "reference" : "Patient/L304"
  },
  "parent" : [
    {
      🔗 "reference" : "Specimen/fhir-osiris-example-biologicalsample-1"
    }
  ],
  "collection" : {
    "collectedDateTime" : "2011-02-08",
    "quantity" : {
      "value" : 60,
      "unit" : "%",
      "code" : "C4055283"
    },
    "bodySite" : {
      "coding" : [
        {
          "system" : "http://terminology.hl7.org/CodeSystem/icd-o-3",
          "code" : "C30"
        }
      ]
    }
  },
  "condition" : [
    {
      "coding" : [
        {
          "code" : "FFPE"
        }
      ],
      "text" : "Storage temperature of the sample."
    }
  ]
}