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FHIR Osiris Implementation Guide
1.1.0 - trial-implementation

This page is part of the OSIRIS FHIR Implementation Guide (v1.1.0: Release) based on FHIR (HL7® FHIR® Standard) R4. This is the current published version. For a full list of available versions, see the Directory of published versions

: Chromosome Value Set - JSON Representation

Draft as of 2025-04-03

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{
  "resourceType" : "ValueSet",
  "id" : "Chromosome",
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: ValueSet Chromosome</b></p><a name=\"Chromosome\"> </a><a name=\"hcChromosome\"> </a><a name=\"Chromosome-en-US\"> </a><p>Ce jeu de valeur (ValueSet) inclut les codes selon les règles suivantes :</p><ul><li>Include ces codes sont définis dans <a href=\"http://loinc.org\"><code>http://loinc.org</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"https://loinc.org/LA21254-0/\">LA21254-0</a></td><td>chr1</td></tr><tr><td><a href=\"https://loinc.org/LA21255-7/\">LA21255-7</a></td><td>chr2</td></tr><tr><td><a href=\"https://loinc.org/LA21256-5/\">LA21256-5</a></td><td>chr3</td></tr><tr><td><a href=\"https://loinc.org/LA21257-3/\">LA21257-3</a></td><td>chr4</td></tr><tr><td><a href=\"https://loinc.org/LA21258-1/\">LA21258-1</a></td><td>chr5</td></tr><tr><td><a href=\"https://loinc.org/LA21259-9/\">LA21259-9</a></td><td>chr6</td></tr><tr><td><a href=\"https://loinc.org/LA21260-7/\">LA21260-7</a></td><td>chr7</td></tr><tr><td><a href=\"https://loinc.org/LA21261-5/\">LA21261-5</a></td><td>chr8</td></tr><tr><td><a href=\"https://loinc.org/LA21262-3/\">LA21262-3</a></td><td>chr9</td></tr><tr><td><a href=\"https://loinc.org/LA21263-1/\">LA21263-1</a></td><td>chr10</td></tr><tr><td><a href=\"https://loinc.org/LA21264-9/\">LA21264-9</a></td><td>chr11</td></tr><tr><td><a href=\"https://loinc.org/LA21265-6/\">LA21265-6</a></td><td>chr12</td></tr><tr><td><a href=\"https://loinc.org/LA21266-4/\">LA21266-4</a></td><td>chr13</td></tr><tr><td><a href=\"https://loinc.org/LA21267-2/\">LA21267-2</a></td><td>chr14</td></tr><tr><td><a href=\"https://loinc.org/LA21268-0/\">LA21268-0</a></td><td>chr15</td></tr><tr><td><a href=\"https://loinc.org/LA21269-8/\">LA21269-8</a></td><td>chr16</td></tr><tr><td><a href=\"https://loinc.org/LA21270-6/\">LA21270-6</a></td><td>chr17</td></tr><tr><td><a href=\"https://loinc.org/LA21271-4/\">LA21271-4</a></td><td>chr18</td></tr><tr><td><a href=\"https://loinc.org/LA21272-2/\">LA21272-2</a></td><td>chr19</td></tr><tr><td><a href=\"https://loinc.org/LA21273-0/\">LA21273-0</a></td><td>chr20</td></tr><tr><td><a href=\"https://loinc.org/LA21274-8/\">LA21274-8</a></td><td>chr21</td></tr><tr><td><a href=\"https://loinc.org/LA21275-5/\">LA21275-5</a></td><td>chr22</td></tr><tr><td><a href=\"https://loinc.org/LA21276-3/\">LA21276-3</a></td><td>chrX</td></tr><tr><td><a href=\"https://loinc.org/LA21277-1/\">LA21277-1</a></td><td>chrY</td></tr></table></li><li>Include ces codes sont définis dans <code>https://github.com/siric-osiris/OSIRIS</code><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td>O19-1</td><td>MT</td></tr><tr><td>O19-2</td><td>viral</td></tr><tr><td>O19-3</td><td>bacterial</td></tr></table></li><li>Include ces codes sont définis dans <a href=\"http://terminology.hl7.org/6.2.0/CodeSystem-umls.html\"><code>http://terminology.hl7.org/CodeSystem/umls</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td>C0439673</td><td>Unknown</td></tr></table></li></ul></div>"
  },
  "url" : "https://ig-osiris.cancer.fr/ig/osiris/ValueSet/Chromosome",
  "version" : "1.1.0",
  "name" : "Chromosome",
  "title" : "Chromosome Value Set",
  "status" : "draft",
  "date" : "2025-04-03T15:16:31+02:00",
  "publisher" : "institutcancer",
  "contact" : [
    {
      "name" : "institutcancer",
      "telecom" : [
        {
          "system" : "url",
          "value" : "http://cancer.fr"
        },
        {
          "system" : "email",
          "value" : "osiris@institutcancer.fr"
        }
      ]
    },
    {
      "name" : "Aurélien JOBARD",
      "telecom" : [
        {
          "system" : "email",
          "value" : "osiris@institutcancer.fr"
        }
      ]
    }
  ],
  "description" : "Chromosome",
  "compose" : {
    "include" : [
      {
        "system" : "http://loinc.org",
        "concept" : [
          {
            "code" : "LA21254-0",
            "display" : "chr1"
          },
          {
            "code" : "LA21255-7",
            "display" : "chr2"
          },
          {
            "code" : "LA21256-5",
            "display" : "chr3"
          },
          {
            "code" : "LA21257-3",
            "display" : "chr4"
          },
          {
            "code" : "LA21258-1",
            "display" : "chr5"
          },
          {
            "code" : "LA21259-9",
            "display" : "chr6"
          },
          {
            "code" : "LA21260-7",
            "display" : "chr7"
          },
          {
            "code" : "LA21261-5",
            "display" : "chr8"
          },
          {
            "code" : "LA21262-3",
            "display" : "chr9"
          },
          {
            "code" : "LA21263-1",
            "display" : "chr10"
          },
          {
            "code" : "LA21264-9",
            "display" : "chr11"
          },
          {
            "code" : "LA21265-6",
            "display" : "chr12"
          },
          {
            "code" : "LA21266-4",
            "display" : "chr13"
          },
          {
            "code" : "LA21267-2",
            "display" : "chr14"
          },
          {
            "code" : "LA21268-0",
            "display" : "chr15"
          },
          {
            "code" : "LA21269-8",
            "display" : "chr16"
          },
          {
            "code" : "LA21270-6",
            "display" : "chr17"
          },
          {
            "code" : "LA21271-4",
            "display" : "chr18"
          },
          {
            "code" : "LA21272-2",
            "display" : "chr19"
          },
          {
            "code" : "LA21273-0",
            "display" : "chr20"
          },
          {
            "code" : "LA21274-8",
            "display" : "chr21"
          },
          {
            "code" : "LA21275-5",
            "display" : "chr22"
          },
          {
            "code" : "LA21276-3",
            "display" : "chrX"
          },
          {
            "code" : "LA21277-1",
            "display" : "chrY"
          }
        ]
      },
      {
        "system" : "https://github.com/siric-osiris/OSIRIS",
        "concept" : [
          {
            "code" : "O19-1",
            "display" : "MT"
          },
          {
            "code" : "O19-2",
            "display" : "viral"
          },
          {
            "code" : "O19-3",
            "display" : "bacterial"
          }
        ]
      },
      {
        "system" : "http://terminology.hl7.org/CodeSystem/umls",
        "concept" : [
          {
            "code" : "C0439673",
            "display" : "Unknown"
          }
        ]
      }
    ]
  }
}