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FHIR Osiris Implementation Guide
1.1.0 - trial-implementation

This page is part of the OSIRIS FHIR Implementation Guide (v1.1.0: Release) based on FHIR (HL7® FHIR® Standard) R4. This is the current published version. For a full list of available versions, see the Directory of published versions

CodeSystem: IBSI Code System

Official URL: https://ibsi.readthedocs.io/en/latest/ Version: 1.1.0
Draft as of 2025-04-03 Computable Name: IBSICS

IBSI Code System

This Code system is referenced in the content logical definition of the following value sets:

Generated Narrative: CodeSystem IBSICS

This code system https://ibsi.readthedocs.io/en/latest/ defines the following codes:

CodeDisplay
HCUG Morphological features
RNU0 Volume
YEKZ Approximate volume
C0JK Surface area
2PR5 Surface to volume ratio
SKGS Compactness 1
BQWJ Compactness 2
KRCK Spherical disproportion
QCFX Sphericity
25C7 Asphericity
KLMA Centre of mass shift
L0JK Maximum 3D diameter
TDIC Major axis length
P9VJ Minor axis length
7J51 Least axis length
Q3CK Elongation
N17B Flatness
PBX1 Volume density - axis-aligned bounding box
R59B Area density - axis-aligned bounding box
ZH1A Volume density - oriented minimum bounding box
IQYR Area density - oriented minimum bounding box
6BDE Volume density - approximate enclosing ellipsoid
RDD2 Area density - approximate enclosing ellipsoid
SWZ1 Volume density - minimum volume enclosing ellipsoid
BRI8 Area density - minimum volume enclosing ellipsoid
R3ER Volume density - convex hull
7T7F Area density - convex hull
99N0 Integrated intensity
N365 Moran's I index
NPT7 Geary's C measure
9ST6 Local intensity features
VJGA Local intensity peak
0F91 Global intensity peak
UHIW Intensity-based statistical features
Q4LE Mean
ECT3 Variance
KE2A Skewness
IPH6 Kurtosis
Y12H Median
1GSF Minimum grey level
QG58 10th percentile
8DWT 90th percentile
84IY Maximum grey level
SALO Interquartile range
2OJQ Range
4FUA Mean absolute deviation
1128 Robust mean absolute deviation
N72L Median absolute deviation
7TET Coefficient of variation
9S40 Quartile coefficient of dispersion
N8CA Energy
5ZWQ Root mean square
ZVCW Intensity histogram features
X6K6 Intensity histogram mean
CH89 Intensity histogram variance
88K1 Intensity histogram skewness
C3I7 Intensity histogram kurtosis
WIFQ Intensity histogram median
1PR8 Intensity histogram minimum grey level
GPMT Intensity histogram 10th percentile
OZ0C Intensity histogram 90th percentile
3NCY Intensity histogram maximum grey level
AMMC Intensity histogram mode
WR0O Intensity histogram interquartile range
5Z3W Intensity histogram range
D2ZX Intensity histogram mean absolute deviation
WRZB Intensity histogram robust mean absolute deviation
4RNL Intensity histogram median absolute deviation
CWYJ Intensity histogram coefficient of variation
SLWD Intensity histogram quartile coefficient of dispersion
TLU2 Intensity histogram entropy
BJ5W Intensity histogram uniformity
12CE Maximum histogram gradient
8E6O Maximum histogram gradient grey level
VQB3 Minimum histogram gradient
RHQZ Minimum histogram gradient grey level
P88C Intensity-volume histogram features
BC2M Volume at intensity fraction
GBPN Intensity at volume fraction
DDTU Volume fraction difference between intensity fractions
CNV2 Intensity fraction difference between volume fractions
9CMM Area under IVH curve
LFYI Grey level co-occurrence based features
GYBY Joint maximum
60VM Joint average
UR99 Joint variance
TU9B Joint entropy
TF7R Difference average
D3YU Difference variance
NTRS Difference entropy
ZGXS Sum average
OEEB Sum variance
P6QZ Sum entropy
8ZQL Angular second moment
ACUI Contrast
8S9J Dissimilarity
IB1Z Inverse difference
NDRX Normalised inverse difference
WF0Z Inverse difference moment
1QCO Normalised inverse difference moment
E8JP Inverse variance
NI2N Correlation
QWB0 Autocorrelation
DG8W Cluster tendency
7NFM Cluster shade
AE86 Cluster prominence
R8DG First measure of information correlation
JN9H Second measure of information correlation
TP0I Grey level run length based features
22OV Short runs emphasis
W4KF Long runs emphasis
V3SW Low grey level run emphasis
G3QZ High grey level run emphasis
HTZT Short run low grey level emphasis
GD3A Short run high grey level emphasis
IVPO Long run low grey level emphasis
3KUM Long run high grey level emphasis
R5YN Grey level non-uniformity
OVBL Normalised grey level non-uniformity
W92Y Run length non-uniformity
IC23 Normalised run length non-uniformity
9ZK5 Run percentage
8CE5 Grey level variance
SXLW Run length variance
HJ9O Run entropy
9SAK Grey level size zone based features
5QRC Small zone emphasis
48P8 Large zone emphasis
XMSY Low grey level zone emphasis
5GN9 High grey level zone emphasis
5RAI Small zone low grey level emphasis
HW1V Small zone high grey level emphasis
YH51 Large zone low grey level emphasis
J17V Large zone high grey level emphasis
JNSA Grey level non-uniformity
Y1RO Normalised grey level non-uniformity
4JP3 Zone size non-uniformity
VB3A Normalised zone size non-uniformity
P30P Zone percentage
BYLV Grey level variance
3NSA Zone size variance
GU8N Zone size entropy
VMDZ Grey level distance zone based features
0GBI Small distance emphasis
MB4I Large distance emphasis
S1RA Low grey level zone emphasis
K26C High grey level zone emphasis
RUVG Small distance low grey level emphasis
DKNJ Small distance high grey level emphasis
A7WM Large distance low grey level emphasis
KLTH Large distance high grey level emphasis
VFT7 Grey level non-uniformity
7HP3 Normalised grey level non-uniformity
V294 Zone distance non-uniformity
IATH Zone distance non-uniformity normalised
VIWW Zone percentage
QK93 Grey level variance
7WT1 Zone distance variance
GBDU Zone distance entropy
IPET Neighbourhood grey tone difference based features
QCDE Coarseness
65HE Contrast
NQ30 Busyness
HDEZ Complexity
1X9X Strength
REK0 Neighbouring grey level dependence based features
SODN Low dependence emphasis
IMOQ High dependence emphasis
TL9H Low grey level count emphasis
OAE7 High grey level count emphasis
EQ3F Low dependence low grey level emphasis
JA6D Low dependence high grey level emphasis
NBZI High dependence low grey level emphasis
9QMG High dependence high grey level emphasis
FP8K Grey level non-uniformity
5SPA Normalised grey level non-uniformity
Z87G Dependence count non-uniformity
OKJI Dependence count non-uniformity normalised
6XV8 Dependence count percentage
1PFV Grey level variance
DNX2 Dependence count variance
FCBV Dependence count entropy
CAS9 Dependence count energy
5QB6 feature aggregation
3IDG feature computed per slice, and averaged over slices
DHQ4 feature computed over the volume
BTW3 feature computed from 2D directional matrix and averaged over 2D directions and slices
SUJT feature computed from a single matrix after merging 2D directional matrices per slice, and averaged over slices
ZW7Z feature computed from a single matrix after merging all 2D directional matrices
ITBB feature computed from 3D directional matrix and averaged over 3D directions
IAZD feature computed from a single matrix after merging all 3D directional matrices
8QNN feature computed from 2D matrix and averaged over slices
62GR feature computed from a single matrix after merging all 2D matrices
KOBO feature computed from 3D matrix
MPUJ grid distances
LIFZ manhattan norm
G9EV euclidean norm
PVMT chebyshev norm
ECJF ROI submasks
SEFI intensity mask
G5KJ morphological mask
IF9H re-segmentation
USB3 range re-segmentation
7ACA outlier filtering
6CK8 distance weighting
LQD8 volume voxel representation
4KW8 volume voxel point set representation
WRJH volume voxel mesh representation
4R0B discretisation
Q3RU fixed bin size
K15C fixed bin number
23XZ data conversion
PCDE image post-acquisition processing
OQYT segmentation
VTM2 interpolation
68QD intensity rounding after interpolation
E8H9 roi mask partial volume
UMPJ interpolation grid
58MB fit to original grid
SBKJ align grid origins
3WE3 align grid centers
026Q align grid centers interpolation grid dimensions
QCY4 align grid centers grid positions
1OBP ROI extraction
JJUI feature computed from a single matrix after merging 2D directional matrices per direction, and averaged over directions
GFJV Calculation Run Space
CINW FeatureParameterSpace
1XL1 texture matrix aggregation parameters
8QU8 intensity discretization parameters
I7X7 histogram equalisation
SSX6 Lloyd-Max discretisation
OWOH feature specific parameters
9LZ9 asymmetrical co-occurrence matrix
2IQV symmetrical co-occurrence matrix
3S2S distance weighting function
V0L6 no distance weighting
4S5Z GLCM specific parameters
0OW5 GLRLM specific parameters
6SLW GLDZM specific parameters
MV8M NGTDM specific parameters
KQW7 IntVolSpecificParameters
X6TI MaximumBound
V2QW MinimumBound
G5MN isovalue algorithm
CRAM marching cube algorithm
FFWD Morphological features specific parameters
VXRR dependence coarseness parameter
NV3D cubic convolution interpolation
2I2N cubic spline interpolation
X13G linear interpolation
EY9L nearest neighbour interpolation
QP79 re-segmentation parameters
LQBA spatial filter properties
WZSA wavelet basis function
QVI9 biorthogonal 3.5 wavelet
2CYL coiflet 1 wavelet
FR3E haar wavelet
P8W0 frequency
IA9Q wavelet filter direction
LCNJ HHH wavelet direction
S7CG HHL wavelet direction
UFRT HLH wavelet direction
RZ96 HLL wavelet direction
CJ43 LHH wavelet direction
76ZU LHL wavelet direction
NTRN LLL wavelet direction
6FPA LLH wavelet direction
G6RO image grey level rounding
IZBZ edge enhancement
ZS1T HistoEqualization
Q2ZB LocalAreaHistoEqualization
OB71 ImageSpace
K7BL ImageVolume
OH8W ROIMask
GF95 IntensityHistogramStandardDeviation
URTB IntensityHistogramTotalEnergy
5ABU Maximum2DDiameterColumn
4S59 Maximum2DDiameterSlice
K57E Maximum2DDiameterRow
EGTD Textural
5XL6 GLCM_MaximalCorrelationCoefficient
9U4X ZeroOrder
PWN1 I10
BOHI I90
JXJA I10minusI90
NK6P V10
4279 V90
WITY V10minusV90
J04R NGLDMSpecificParameters
ASHO Voxel
NOVP ImageFilterSpace
XSJL AbsoluteFiltering
1WTP ButterworthFilter
PJBO ColliageFilter
FTIJ MedianFilter
9IQY SavitzkyGolayFilter
SUUU WaveletFilter
WVUQ ROIMask_PartialVolumeCutOff
REY6 SegmentationMethods
SBDE Automated
OAX6 Manual
TGHU SemiAutomated
6VTB SupervisedMethods
TV5D DeepLearning
KJIF NeuralNetwork
D3RT SupportVectorMachine
ZJJY UnsupervisedMethods
2KAW CMeansFuzzy
OPMG Kmean
HF5R Manual
W455 InPolygon
8LVU RayCasting
WAB9 EdgeBased
XL0Q GradientEdgeBased
N20K HoughTransformBased
VZXY LaplacianEdgeBased
EOOR MarrHildrethEdgeBased
Q6DD ModelBased
MGZ1 ActiveShape
SR1C AppereanceModel
LAQN AtlasModel
UU0Q DeformableModel
ZCA3 RegionBased
RZ08 RegionGrowing
A9GC RegionSplitting
TAWD SplitAndMerge
Q025 WatershedAlgorithm
L2WC ThresholdingBased
E8C8 GlobalThresholding
81TK LocalAdaptiveThresholding
4VLP Institution
DTYK Phantom
YUBG Software
SU1L SoftwareProperties
59QT License
1DUG OpenSource
G91N Proprietary
W2J1 Version
M9H0 VersionStatus
4AGS Filter application
7QSE filter in axial plane
0ODV volumetric filter
GBYQ boundary condition
Z3VE constant value
SIJG nearest value
Z7YO periodic
ZDTV mirror
S60F MeanFilter
YNOF kernel support
8BC3 GaussianFilter
L6PA LaplacianFilter
41LN Gaussian envelope scale
WGPM Filter size cutoff
JTXT Laws kernel filter
JVAD Laws kernels
B5BZ Laws L3 kernel
6HRH Laws L5 kernel
LJ4T Laws E3 kernel
2WPV Laws E5 kernel
MK5Z Laws S3 kernel
RXA1 Laws S5 kernel
4ENO Laws W5 kernel
3A1W Laws R5 kernel
O1AQ Pseudo-rotational invariance
SVKW Response map pooling
M1CY average
0TAW max
DUX4 min
PQSD Laws energy map
I176 Laws energy map distance
Q88H GaborFilter
S4N6 Gabor wavelength lambda
GDR5 Gabor ellipticity gamma
FQER Gabor orientation theta
XTGK Gabor orientation theta step
25BO Separable wavelets
BPXS Separable wavelet family
UOUE haar wavelet
UK1F Separable wavelet filter combination
PPF6 LL wavelet combination
P60O HL wavelet combination
M0S1 LH wavelet combination
WQ2Z HH wavelet combination
KZAS LLL wavelet combination
TY49 LLH wavelet combination
4KRX LHL wavelet combination
UUV9 HLL wavelet combination
UIT8 LHH wavelet combination
QTIT HHL wavelet combination
8LD2 HLH wavelet combination
OYUC HHH wavelet combination
GCEK wavelet decomposition level
PH3R Separable wavelet decimated transform
CVCQ Separable wavelet undecimated transform
LODD Non-separable wavelet
389V Non-separable wavelet family
GWM2 Shannon wavelet
PRT7 Simoncelli wavelet
AYRS Riesz transformation
OC48 Riesz transformation order
1SD3 Riesz filter steering
XKP5 Image dimension
1F0N k1-direction
M2EZ k2-direction
R83H k3-direction
Y4GJ Convolution operation
YHT3 Aggregating intensities from a response map
5P3T Response map
0J1M modulus, magnitude or absolute response map
V530 angle, phase or argument response map
F7DI real
LI3Y imaginary
52 Intensity rounding: Describe how fractional Hounsfield Units are rounded to integer values after interpolation
56a Discretisation method: Describe the method used to discretise image intensities
56b Discretisation method: Describe the number of bins (FBN) or the bin size (FBS) used for discretisation
56c Discretisation method: Describe the lowest intensity in the first bin for FBS discretisation
61 Software availability: Describe which software and version was used to compute image biomarkers
62 Texture matrix aggregation: Define how texture-matrix based biomarkers were computed from underlying texture matrices
63 Distance weighting: Describe which software and version was used to compute image biomarkers