Generated Narrative: StructureDefinition radiomics-criteria-settings Nom Drapeaux Card. Type Description et contraintes Extension 0..* Extension Radiomics Criteria Settings extension 11..* Extension Extension Slices pour extension Content/Rules for all slices extension:softwareName S 1..1 Extension Software name extension 2..* Extension Extension Slices pour extension Content/Rules for all slices extension:code S 1..1 Extension ISBI Code extension 0..0 url 1..1 uri "code" Slices pour value[x] 0..1 base64Binary, boolean, canonical(), code, date, dateTime, decimal, id, instant, integer, markdown, oid, positiveInt, string, time, unsignedInt, uri, url, uuid, Address, Age, Annotation, Attachment, CodeableConcept, Coding, ContactPoint, Count, Distance, Duration, HumanName, Identifier, Money, Period, Quantity, Range, Ratio, Reference(), SampledData, Signature, Timing, ContactDetail, Contributor, DataRequirement, Expression, ParameterDefinition, RelatedArtifact, TriggerDefinition, UsageContext, Dosage, Meta Value of extension Slice: Unordered, Open by type:$this value[x]:valueCoding 0..1 Coding Value of extension Required Pattern: At least the following system 1..1 uri Identity of the terminology system Fixed Value: https://ibsi.readthedocs.io/en/latest/ code 1..1 code Symbol in syntax defined by the system Fixed Value: 61 extension:valueString S 1..1 Extension Software name extension 0..0 url 1..1 uri "valueString" Slices pour value[x] 1..1 string Value of extension Slice: Unordered, Open by type:$this value[x]:valueString S 1..1 string Value of extension url 1..1 uri "softwareName" value[x] 0..0 extension:softwareVersion S 1..1 Extension Version name extension 2..* Extension Extension Slices pour extension Content/Rules for all slices extension:code S 1..1 Extension ISBI Code extension 0..0 url 1..1 uri "code" Slices pour value[x] 0..1 base64Binary, boolean, canonical(), code, date, dateTime, decimal, id, instant, integer, markdown, oid, positiveInt, string, time, unsignedInt, uri, url, uuid, Address, Age, Annotation, Attachment, CodeableConcept, Coding, ContactPoint, Count, Distance, Duration, HumanName, Identifier, Money, Period, Quantity, Range, Ratio, Reference(), SampledData, Signature, Timing, ContactDetail, Contributor, DataRequirement, Expression, ParameterDefinition, RelatedArtifact, TriggerDefinition, UsageContext, Dosage, Meta Value of extension Slice: Unordered, Open by type:$this value[x]:valueCoding 0..1 Coding Value of extension Required Pattern: At least the following system 1..1 uri Identity of the terminology system Fixed Value: https://ibsi.readthedocs.io/en/latest/ code 1..1 code Symbol in syntax defined by the system Fixed Value: 61 extension:valueString S 1..1 Extension Version name extension 0..0 url 1..1 uri "valueString" Slices pour value[x] 1..1 string Value of extension Slice: Unordered, Open by type:$this value[x]:valueString S 1..1 string Value of extension url 1..1 uri "softwareVersion" value[x] 0..0 extension:localizationMethod S 1..1 Extension Location of the the method of calculation : LOCAL || GLOBAL extension 0..0 url 1..1 uri "localizationMethod" Slices pour value[x] 1..1 string Value of extension Slice: Unordered, Open by type:$this value[x]:valueString S 1..1 string Value of extension extension:windowMatrix S 0..1 Extension Calculation window url 1..1 uri "windowMatrix" extension:usedImageFilter S 1..1 Extension Method used to filter the images before calculation extension 0..0 url 1..1 uri "usedImageFilter" Slices pour value[x] 1..1 string Value of extension Slice: Unordered, Open by type:$this value[x]:valueString S 1..1 string Value of extension extension:usedImageFilterParameters S 1..1 Extension Parameters of the used method url 1..1 uri "usedImageFilterParameters" extension:distanceWeighting S 1..1 Extension Distance weighting extension 2..* Extension Extension Slices pour extension Content/Rules for all slices extension:code S 1..1 Extension ISBI Code extension 0..0 url 1..1 uri "code" Slices pour value[x] 0..1 base64Binary, boolean, canonical(), code, date, dateTime, decimal, id, instant, integer, markdown, oid, positiveInt, string, time, unsignedInt, uri, url, uuid, Address, Age, Annotation, Attachment, CodeableConcept, Coding, ContactPoint, Count, Distance, Duration, HumanName, Identifier, Money, Period, Quantity, Range, Ratio, Reference(), SampledData, Signature, Timing, ContactDetail, Contributor, DataRequirement, Expression, ParameterDefinition, RelatedArtifact, TriggerDefinition, UsageContext, Dosage, Meta Value of extension Slice: Unordered, Open by type:$this value[x]:valueCoding 0..1 Coding Value of extension Required Pattern: At least the following system 1..1 uri Identity of the terminology system Fixed Value: https://ibsi.readthedocs.io/en/latest/ code 1..1 code Symbol in syntax defined by the system Fixed Value: 63 extension:valueString S 1..1 Extension Distance weighting extension 0..0 url 1..1 uri "valueString" Slices pour value[x] 1..1 string Value of extension Slice: Unordered, Open by type:$this value[x]:valueString S 1..1 string Value of extension url 1..1 uri "distanceWeighting" value[x] 0..0 extension:discretisationMethod S 1..1 Extension Resampling intensity method: FBS || FBN extension 2..* Extension Extension Slices pour extension Content/Rules for all slices extension:code S 1..1 Extension ISBI Code extension 0..0 url 1..1 uri "code" Slices pour value[x] 0..1 base64Binary, boolean, canonical(), code, date, dateTime, decimal, id, instant, integer, markdown, oid, positiveInt, string, time, unsignedInt, uri, url, uuid, Address, Age, Annotation, Attachment, CodeableConcept, Coding, ContactPoint, Count, Distance, Duration, HumanName, Identifier, Money, Period, Quantity, Range, Ratio, Reference(), SampledData, Signature, Timing, ContactDetail, Contributor, DataRequirement, Expression, ParameterDefinition, RelatedArtifact, TriggerDefinition, UsageContext, Dosage, Meta Value of extension Slice: Unordered, Open by type:$this value[x]:valueCoding 0..1 Coding Value of extension Required Pattern: At least the following system 1..1 uri Identity of the terminology system Fixed Value: https://ibsi.readthedocs.io/en/latest/ code 1..1 code Symbol in syntax defined by the system Fixed Value: 56a extension:valueString S 1..1 Extension Resampling intensity method extension 0..0 url 1..1 uri "valueString" Slices pour value[x] 1..1 string Value of extension Slice: Unordered, Open by type:$this value[x]:valueString S 1..1 string Value of extension url 1..1 uri "discretisationMethod" value[x] 0..0 extension:binSize S 1..1 Extension Number of bins or size of bin extension 2..* Extension Extension Slices pour extension Content/Rules for all slices extension:code S 1..1 Extension ISBI Code extension 0..0 url 1..1 uri "code" Slices pour value[x] 0..1 base64Binary, boolean, canonical(), code, date, dateTime, decimal, id, instant, integer, markdown, oid, positiveInt, string, time, unsignedInt, uri, url, uuid, Address, Age, Annotation, Attachment, CodeableConcept, Coding, ContactPoint, Count, Distance, Duration, HumanName, Identifier, Money, Period, Quantity, Range, Ratio, Reference(), SampledData, Signature, Timing, ContactDetail, Contributor, DataRequirement, Expression, ParameterDefinition, RelatedArtifact, TriggerDefinition, UsageContext, Dosage, Meta Value of extension Slice: Unordered, Open by type:$this value[x]:valueCoding 0..1 Coding Value of extension Required Pattern: At least the following system 1..1 uri Identity of the terminology system Fixed Value: https://ibsi.readthedocs.io/en/latest/ code 1..1 code Symbol in syntax defined by the system Fixed Value: 56b extension:valueDecimal S 1..1 Extension Number (FBN) Or size (FBS) bins extension 0..0 url 1..1 uri "valueDecimal" Slices pour value[x] 1..1 decimal Value of extension Slice: Unordered, Open by type:$this value[x]:valueDecimal S 1..1 decimal Value of extension url 1..1 uri "binSize" value[x] 0..0 extension:bounds S 0..1 Extension Bounds extension 0..0 url 1..1 uri "bounds" Slices pour value[x] 0..1 base64Binary, boolean, canonical(), code, date, dateTime, decimal, id, instant, integer, markdown, oid, positiveInt, string, time, unsignedInt, uri, url, uuid, Address, Age, Annotation, Attachment, CodeableConcept, Coding, ContactPoint, Count, Distance, Duration, HumanName, Identifier, Money, Period, Quantity, Range, Ratio, Reference(), SampledData, Signature, Timing, ContactDetail, Contributor, DataRequirement, Expression, ParameterDefinition, RelatedArtifact, TriggerDefinition, UsageContext, Dosage, Meta Value of extension Slice: Unordered, Open by type:$this value[x]:valueString S 0..1 string Value of extension extension:lowestIntensity S 0..1 Extension Lowest intensity of discretization of the first bin extension 2..* Extension Extension Slices pour extension Content/Rules for all slices extension:code S 1..1 Extension ISBI Code extension 0..0 url 1..1 uri "code" Slices pour value[x] 0..1 base64Binary, boolean, canonical(), code, date, dateTime, decimal, id, instant, integer, markdown, oid, positiveInt, string, time, unsignedInt, uri, url, uuid, Address, Age, Annotation, Attachment, CodeableConcept, Coding, ContactPoint, Count, Distance, Duration, HumanName, Identifier, Money, Period, Quantity, Range, Ratio, Reference(), SampledData, Signature, Timing, ContactDetail, Contributor, DataRequirement, Expression, ParameterDefinition, RelatedArtifact, TriggerDefinition, UsageContext, Dosage, Meta Value of extension Slice: Unordered, Open by type:$this value[x]:valueCoding 0..1 Coding Value of extension Required Pattern: At least the following system 1..1 uri Identity of the terminology system Fixed Value: https://ibsi.readthedocs.io/en/latest/ code 1..1 code Symbol in syntax defined by the system Fixed Value: 56c extension:valueDecimal S 1..1 Extension Lowest Intensity extension 0..0 url 1..1 uri "valueDecimal" Slices pour value[x] 1..1 decimal Value of extension Slice: Unordered, Open by type:$this value[x]:valueDecimal S 1..1 decimal Value of extension url 1..1 uri "lowestIntensity" value[x] 0..0 extension:biggestIntensity S 0..1 Extension Biggest intensity of discretization of the first bin extension 2..* Extension Extension Slices pour extension Content/Rules for all slices extension:code S 1..1 Extension ISBI Code extension 0..0 url 1..1 uri "code" Slices pour value[x] 0..1 base64Binary, boolean, canonical(), code, date, dateTime, decimal, id, instant, integer, markdown, oid, positiveInt, string, time, unsignedInt, uri, url, uuid, Address, Age, Annotation, Attachment, CodeableConcept, Coding, ContactPoint, Count, Distance, Duration, HumanName, Identifier, Money, Period, Quantity, Range, Ratio, Reference(), SampledData, Signature, Timing, ContactDetail, Contributor, DataRequirement, Expression, ParameterDefinition, RelatedArtifact, TriggerDefinition, UsageContext, Dosage, Meta Value of extension Slice: Unordered, Open by type:$this value[x]:valueCoding 0..1 Coding Value of extension Required Pattern: At least the following system 1..1 uri Identity of the terminology system Fixed Value: https://ibsi.readthedocs.io/en/latest/ code 1..1 code Symbol in syntax defined by the system Fixed Value: 56c extension:valueDecimal S 1..1 Extension Biggest Intensity extension 0..0 url 1..1 uri "valueDecimal" Slices pour value[x] 1..1 decimal Value of extension Slice: Unordered, Open by type:$this value[x]:valueDecimal S 1..1 decimal Value of extension url 1..1 uri "biggestIntensity" value[x] 0..0 extension:boundsRangeOfValueAfterDiscretisation S 1..1 Extension Bounds of the intensity value after discretization extension 0..0 url 1..1 uri "boundsRangeOfValueAfterDiscretisation" Slices pour value[x] 1..1 string Value of extension Slice: Unordered, Open by type:$this value[x]:valueString S 1..1 string Value of extension extension:spatialResamplingMethod S 1..1 Extension Spatial resampling method: Bicubic spline|Tricubic spline|Lagrangian polynomial extension 0..0 url 1..1 uri "spatialResamplingMethod" Slices pour value[x] 1..1 string Value of extension Slice: Unordered, Open by type:$this value[x]:valueString S 1..1 string Value of extension extension:spatialResamplingValues S 0..1 Extension Spatial resampling values: x, y, z extension 0..0 url 1..1 uri "spatialResamplingValues" Slices pour value[x] 0..1 base64Binary, boolean, canonical(), code, date, dateTime, decimal, id, instant, integer, markdown, oid, positiveInt, string, time, unsignedInt, uri, url, uuid, Address, Age, Annotation, Attachment, CodeableConcept, Coding, ContactPoint, Count, Distance, Duration, HumanName, Identifier, Money, Period, Quantity, Range, Ratio, Reference(), SampledData, Signature, Timing, ContactDetail, Contributor, DataRequirement, Expression, ParameterDefinition, RelatedArtifact, TriggerDefinition, UsageContext, Dosage, Meta Value of extension Slice: Unordered, Open by type:$this value[x]:valueString S 0..1 string Value of extension extension:textureMatrixAggregation S 1..1 Extension Description of the calculation of biomarkers based on texture matrices extension 2..* Extension Extension Slices pour extension Content/Rules for all slices extension:code S 1..1 Extension ISBI Code extension 0..0 url 1..1 uri "code" Slices pour value[x] 0..1 base64Binary, boolean, canonical(), code, date, dateTime, decimal, id, instant, integer, markdown, oid, positiveInt, string, time, unsignedInt, uri, url, uuid, Address, Age, Annotation, Attachment, CodeableConcept, Coding, ContactPoint, Count, Distance, Duration, HumanName, Identifier, Money, Period, Quantity, Range, Ratio, Reference(), SampledData, Signature, Timing, ContactDetail, Contributor, DataRequirement, Expression, ParameterDefinition, RelatedArtifact, TriggerDefinition, UsageContext, Dosage, Meta Value of extension Slice: Unordered, Open by type:$this value[x]:valueCoding 0..1 Coding Value of extension Required Pattern: At least the following system 1..1 uri Identity of the terminology system Fixed Value: https://ibsi.readthedocs.io/en/latest/ code 1..1 code Symbol in syntax defined by the system Fixed Value: 62 extension:valueString S 1..1 Extension Texture Matrix Aggregation extension 0..0 url 1..1 uri "valueString" Slices pour value[x] 1..1 string Value of extension Slice: Unordered, Open by type:$this value[x]:valueString S 1..1 string Value of extension url 1..1 uri "textureMatrixAggregation" value[x] 0..0 url 1..1 uri "https://ig-osiris.cancer.fr/ig/osiris/StructureDefinition/radiomics-criteria-settings" value[x] 0..0 Documentation for this format
All FHIR elements must have a @value or children
hasValue() or (children().count() > id.count())
Must have either extensions or value[x], not both
exists(f:extension)!=exists(f:*[starts-with(local-name(.), 'value')])
Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.
Extensions are always sliced by (at least) url
exists(f:extension)!=exists(f:*[starts-with(local-name(.), "value")])
Name of the software used to calculate the biomarkers image (IBSI 61)
Source of the definition for the extension code - a logical name or a URL.
The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.
Value of extension - must be one of a constrained set of the data types (see [Extensibility](http://hl7.org/fhir/R4/extensibility.html) for a list).
Version of the software used to calculate the biomarkers image (IBSI 61)
Location of the the method of calculation : LOCAL || GLOBAL
The field allows you to define whether the calculation method has been applied to the whole image (voxels of the image) or on a area of interest (ROI).
Matrix of the calculation window (ex. 5x5x5 voxels)
Additional content defined by implementations
May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.
There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.
Method used to filter the images before calculation
Parameters of the method used to filter the images before the calculation
Define how CM, RLM, NGTDM and NGLDM weight the distances, for example no weighting (IBSI 63)
Resampling intensity method: FBS || FBN (IBSI 56a)
Number of bins (FBN), size of bins (FBS) for discretization (IBSI 56b)
Bounds in intensity to perform the discretization
Lowest intensity of discretization of the first bin
Lowest intensity of the first bin for the FBS discretization (IBSI 56c)
Biggest intensity of discretization of the first bin
Biggest intensity of the last bin for the FBS discretization (IBSI 56c)
Bounds of the intensity value after discretization
Spatial resampling method: Bicubic spline|Tricubic spline|Lagrangian polynomial
Description of the calculation of biomarkers based on texture matrices
Define how texture matrix-based biomarkers were calculated from the underlying texture matrices (IBSI 62)