FHIR Osiris Implementation Guide
1.1.0 - trial-implementation

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## Extension: Biological Sample Origin

Official URL: https://ig-osiris.cancer.fr/ig/osiris/StructureDefinition/BiologicalSampleOrigin | Version: 1.1.0
Draft as of 2025-04-03 | Computable Name: BiologicalSampleOrigin

Biological Sample Origin

Context of Use

This extension may be used on the following element(s):

- Element ID: `Element`

Usage info

Usage:

- Use this Extension: Biological Sample
- Examples for this Extension: Specimen/fhir-osiris-example-biologicalsample-1 and Specimen/fhir-osiris-example-biologicalsample-2

### Formal Views of Extension Content

Description of Profiles, Differentials, Snapshots, and how the XML and JSON presentations work.

- Differential Table
- Snapshot Table
- Statistics/References
- All

This structure is derived from Extension

Nom | Drapeaux | Card. | Type | Description et contraintes
--- | --- | --- | --- | ---
Extension |  | 0..* | Extension | Biological Sample Origin
extension |  | 0..0 |  |
url |  | 1..1 | uri | "https://ig-osiris.cancer.fr/ig/osiris/StructureDefinition/BiologicalSampleOrigin"
Slices pour value[x] |  | 1..1 | CodeableConcept | Value of extension Slice: Unordered, Open by type:$this
value[x]:valueCodeableConcept | S | 1..1 | CodeableConcept | The origin of the sample Binding: Biological Sample Origin Value Set (extensible)
text |  | 0..1 | string | Plain text representation of the concept Required Pattern: Origin of the sample
Documentation for this format

Nom | Drapeaux | Card. | Type | Description et contraintes
--- | --- | --- | --- | ---
Extension |  | 0..* | Extension | Biological Sample Origin
id |  | 0..1 | string | Unique id for inter-element referencing
extension |  | 0..0 |  |
url |  | 1..1 | uri | "https://ig-osiris.cancer.fr/ig/osiris/StructureDefinition/BiologicalSampleOrigin"
Slices pour value[x] |  | 1..1 | CodeableConcept | Value of extension Slice: Unordered, Closed by type:$this
value[x]:valueCodeableConcept | S | 1..1 | CodeableConcept | The origin of the sample Binding: Biological Sample Origin Value Set (extensible)
id |  | 0..1 | string | Unique id for inter-element referencing
extension |  | 0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url
coding | Σ | 0..* | Coding | Code defined by a terminology system
text | Σ | 0..1 | string | Plain text representation of the concept Required Pattern: Origin of the sample
Documentation for this format

This structure is derived from Extension

Résumé

Simple Extension of type CodeableConcept: Biological Sample Origin

Differential View

This structure is derived from Extension

Nom | Drapeaux | Card. | Type | Description et contraintes
--- | --- | --- | --- | ---
Extension |  | 0..* | Extension | Biological Sample Origin
extension |  | 0..0 |  |
url |  | 1..1 | uri | "https://ig-osiris.cancer.fr/ig/osiris/StructureDefinition/BiologicalSampleOrigin"
Slices pour value[x] |  | 1..1 | CodeableConcept | Value of extension Slice: Unordered, Open by type:$this
value[x]:valueCodeableConcept | S | 1..1 | CodeableConcept | The origin of the sample Binding: Biological Sample Origin Value Set (extensible)
text |  | 0..1 | string | Plain text representation of the concept Required Pattern: Origin of the sample
Documentation for this format

Snapshot View

Nom | Drapeaux | Card. | Type | Description et contraintes
--- | --- | --- | --- | ---
Extension |  | 0..* | Extension | Biological Sample Origin
id |  | 0..1 | string | Unique id for inter-element referencing
extension |  | 0..0 |  |
url |  | 1..1 | uri | "https://ig-osiris.cancer.fr/ig/osiris/StructureDefinition/BiologicalSampleOrigin"
Slices pour value[x] |  | 1..1 | CodeableConcept | Value of extension Slice: Unordered, Closed by type:$this
value[x]:valueCodeableConcept | S | 1..1 | CodeableConcept | The origin of the sample Binding: Biological Sample Origin Value Set (extensible)
id |  | 0..1 | string | Unique id for inter-element referencing
extension |  | 0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url
coding | Σ | 0..* | Coding | Code defined by a terminology system
text | Σ | 0..1 | string | Plain text representation of the concept Required Pattern: Origin of the sample
Documentation for this format

This structure is derived from Extension

Résumé

Simple Extension of type CodeableConcept: Biological Sample Origin

Other representations of profile: CSV, Excel, Schematron

#### Terminology Bindings

Path | Conformité | ValueSet | URI
Extension.value[x]:valueCodeableConcept | extensible | BiologicalSampleOrigin `https://ig-osiris.cancer.fr/ig/osiris/ValueSet/BiologicalSampleOrigin` from this IG