FHIR Osiris Implementation Guide
1.1.0 - trial-implementation

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## : fhir-osiris-example-biologicalsample-1 - TTL Representation

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    @prefix fhir: <http://hl7.org/fhir/> .
    @prefix owl: <http://www.w3.org/2002/07/owl#> .
    @prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
    @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
    @prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

    # - resource -------------------------------------------------------------------

     a fhir:Specimen ;
      fhir:nodeRole fhir:treeRoot ;
      fhir:id [ fhir:v "fhir-osiris-example-biologicalsample-1"] ; #
      fhir:meta [
        ( fhir:profile [
    fhir:v "https://ig-osiris.cancer.fr/ig/osiris/StructureDefinition/onco-biological-sample"^^xsd:anyURI ;
    fhir:link <https://ig-osiris.cancer.fr/ig/osiris/StructureDefinition/onco-biological-sample>     ] )
      ] ; #
      fhir:text [
    fhir:status [ fhir:v "extensions" ] ;
    fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: Specimen fhir-osiris-example-biologicalsample-1</b></p><a name=\"fhir-osiris-example-biologicalsample-1\"> </a><a name=\"hcfhir-osiris-example-biologicalsample-1\"> </a><a name=\"fhir-osiris-example-biologicalsample-1-en-US\"> </a><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\"/><p style=\"margin-bottom: 0px\">Profil: <a href=\"StructureDefinition-onco-biological-sample.html\">Biological Sample</a></p></div><p><b>Biological Sample Origin</b>: <span title=\"Codes:{https://terminology.arkhn.com/osiris O59-2}\">Origin of the sample</span></p><p><b>Based On Condition (Tumor Pathology Event)</b>: <a href=\"Condition-fhir-osiris-example-TumorPathologyEvent-instance-1.html\">Condition C0677930</a></p><p><b>identifier</b>: ech primary</p><p><b>type</b>: <span title=\"Codes:{http://terminology.hl7.org/CodeSystem/umls C4039816}\">C4039816</span></p><p><b>subject</b>: <a href=\"Patient-L304.html\">Patient Anonyme Male, Date de Naissance :1967-11-08</a></p><h3>Collections</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Collected[x]</b></td><td><b>Quantity</b></td><td><b>BodySite</b></td></tr><tr><td style=\"display: none\">*</td><td>2005-12-27</td><td>30 %<span style=\"background: LightGoldenRodYellow\"> (Details: [not stated]  codeC4055283 = 'C4055283')</span></td><td><span title=\"Codes:{http://terminology.hl7.org/CodeSystem/icd-o-3 C34}\">C34</span></td></tr></table><p><b>condition</b>: <span title=\"Codes:{https://learning.iarc.fr/biobanking/all-resources/sample-and-data-management/miabis Tissue Frozen}\">Storage temperature of the sample.</span></p></div>"^^rdf:XMLLiteral
      ] ; #
      fhir:extension ( [
    fhir:url [ fhir:v "https://ig-osiris.cancer.fr/ig/osiris/StructureDefinition/BiologicalSampleOrigin"^^xsd:anyURI ] ;
    fhir:value [
    a fhir:CodeableConcept ;
          ( fhir:coding [
    fhir:system [ fhir:v "https://terminology.arkhn.com/osiris"^^xsd:anyURI ] ;
    fhir:code [ fhir:v "O59-2" ]       ] ) ;
    fhir:text [ fhir:v "Origin of the sample" ]     ]
      ] [
    fhir:url [ fhir:v "https://ig-osiris.cancer.fr/ig/osiris/StructureDefinition/BasedOnCondition"^^xsd:anyURI ] ;
    fhir:value [
    a fhir:Reference ;
    fhir:reference [ fhir:v "Condition/fhir-osiris-example-TumorPathologyEvent-instance-1" ]     ]
      ] ) ; #
      fhir:identifier ( [
    fhir:value [ fhir:v "ech primary" ]
      ] ) ; #
      fhir:type [
        ( fhir:coding [
    fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/umls"^^xsd:anyURI ] ;
    fhir:code [ fhir:v "C4039816" ]     ] )
      ] ; #
      fhir:subject [
    fhir:reference [ fhir:v "Patient/L304" ]
      ] ; #
      fhir:collection [
    fhir:collected [
    a fhir:dateTime ;
    fhir:v "2005-12-27"^^xsd:date     ] ;
    fhir:quantity [
    fhir:value [ fhir:v "30"^^xsd:decimal ] ;
    fhir:unit [ fhir:v "%" ] ;
    fhir:code [ fhir:v "C4055283" ]     ] ;
    fhir:bodySite [
          ( fhir:coding [
    fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/icd-o-3"^^xsd:anyURI ] ;
    fhir:code [ fhir:v "C34" ]       ] )     ]
      ] ; #
      fhir:condition ( [
        ( fhir:coding [
    fhir:system [ fhir:v "https://learning.iarc.fr/biobanking/all-resources/sample-and-data-management/miabis"^^xsd:anyURI ] ;
    fhir:code [ fhir:v "Tissue Frozen" ]     ] ) ;
    fhir:text [ fhir:v "Storage temperature of the sample." ]
      ] ) . #