FHIR Osiris Implementation Guide
1.1.0 - trial-implementation

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## : Chromosome Value Set - JSON Representation

Draft as of 2025-04-03

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    {
      "resourceType" : "ValueSet",
      "id" : "Chromosome",
      "text" : {
        "status" : "generated",
        "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: ValueSet Chromosome</b></p><a name=\"Chromosome\"> </a><a name=\"hcChromosome\"> </a><a name=\"Chromosome-en-US\"> </a><p>Ce jeu de valeur (ValueSet) inclut les codes selon les règles suivantes :</p><ul><li>Include ces codes sont définis dans <a href=\"http://loinc.org\"><code>http://loinc.org</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"https://loinc.org/LA21254-0/\">LA21254-0</a></td><td>chr1</td></tr><tr><td><a href=\"https://loinc.org/LA21255-7/\">LA21255-7</a></td><td>chr2</td></tr><tr><td><a href=\"https://loinc.org/LA21256-5/\">LA21256-5</a></td><td>chr3</td></tr><tr><td><a href=\"https://loinc.org/LA21257-3/\">LA21257-3</a></td><td>chr4</td></tr><tr><td><a href=\"https://loinc.org/LA21258-1/\">LA21258-1</a></td><td>chr5</td></tr><tr><td><a href=\"https://loinc.org/LA21259-9/\">LA21259-9</a></td><td>chr6</td></tr><tr><td><a href=\"https://loinc.org/LA21260-7/\">LA21260-7</a></td><td>chr7</td></tr><tr><td><a href=\"https://loinc.org/LA21261-5/\">LA21261-5</a></td><td>chr8</td></tr><tr><td><a href=\"https://loinc.org/LA21262-3/\">LA21262-3</a></td><td>chr9</td></tr><tr><td><a href=\"https://loinc.org/LA21263-1/\">LA21263-1</a></td><td>chr10</td></tr><tr><td><a href=\"https://loinc.org/LA21264-9/\">LA21264-9</a></td><td>chr11</td></tr><tr><td><a href=\"https://loinc.org/LA21265-6/\">LA21265-6</a></td><td>chr12</td></tr><tr><td><a href=\"https://loinc.org/LA21266-4/\">LA21266-4</a></td><td>chr13</td></tr><tr><td><a href=\"https://loinc.org/LA21267-2/\">LA21267-2</a></td><td>chr14</td></tr><tr><td><a href=\"https://loinc.org/LA21268-0/\">LA21268-0</a></td><td>chr15</td></tr><tr><td><a href=\"https://loinc.org/LA21269-8/\">LA21269-8</a></td><td>chr16</td></tr><tr><td><a href=\"https://loinc.org/LA21270-6/\">LA21270-6</a></td><td>chr17</td></tr><tr><td><a href=\"https://loinc.org/LA21271-4/\">LA21271-4</a></td><td>chr18</td></tr><tr><td><a href=\"https://loinc.org/LA21272-2/\">LA21272-2</a></td><td>chr19</td></tr><tr><td><a href=\"https://loinc.org/LA21273-0/\">LA21273-0</a></td><td>chr20</td></tr><tr><td><a href=\"https://loinc.org/LA21274-8/\">LA21274-8</a></td><td>chr21</td></tr><tr><td><a href=\"https://loinc.org/LA21275-5/\">LA21275-5</a></td><td>chr22</td></tr><tr><td><a href=\"https://loinc.org/LA21276-3/\">LA21276-3</a></td><td>chrX</td></tr><tr><td><a href=\"https://loinc.org/LA21277-1/\">LA21277-1</a></td><td>chrY</td></tr></table></li><li>Include ces codes sont définis dans <code>https://github.com/siric-osiris/OSIRIS</code><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td>O19-1</td><td>MT</td></tr><tr><td>O19-2</td><td>viral</td></tr><tr><td>O19-3</td><td>bacterial</td></tr></table></li><li>Include ces codes sont définis dans <a href=\"http://terminology.hl7.org/6.2.0/CodeSystem-umls.html\"><code>http://terminology.hl7.org/CodeSystem/umls</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td>C0439673</td><td>Unknown</td></tr></table></li></ul></div>"
      },
      "url" : "https://ig-osiris.cancer.fr/ig/osiris/ValueSet/Chromosome",
      "version" : "1.1.0",
      "name" : "Chromosome",
      "title" : "Chromosome Value Set",
      "status" : "draft",
      "date" : "2025-04-03T14:14:07+02:00",
      "publisher" : "institutcancer",
      "contact" : [
        {
          "name" : "institutcancer",
          "telecom" : [
            {
              "system" : "url",
              "value" : "http://cancer.fr"
            },
            {
              "system" : "email",
              "value" : "osiris@institutcancer.fr"
            }
          ]
        },
        {
          "name" : "Aurélien JOBARD",
          "telecom" : [
            {
              "system" : "email",
              "value" : "osiris@institutcancer.fr"
            }
          ]
        }
      ],
      "description" : "Chromosome",
      "compose" : {
        "include" : [
          {
            "system" : "http://loinc.org",
            "concept" : [
              {
                "code" : "LA21254-0",
                "display" : "chr1"
              },
              {
                "code" : "LA21255-7",
                "display" : "chr2"
              },
              {
                "code" : "LA21256-5",
                "display" : "chr3"
              },
              {
                "code" : "LA21257-3",
                "display" : "chr4"
              },
              {
                "code" : "LA21258-1",
                "display" : "chr5"
              },
              {
                "code" : "LA21259-9",
                "display" : "chr6"
              },
              {
                "code" : "LA21260-7",
                "display" : "chr7"
              },
              {
                "code" : "LA21261-5",
                "display" : "chr8"
              },
              {
                "code" : "LA21262-3",
                "display" : "chr9"
              },
              {
                "code" : "LA21263-1",
                "display" : "chr10"
              },
              {
                "code" : "LA21264-9",
                "display" : "chr11"
              },
              {
                "code" : "LA21265-6",
                "display" : "chr12"
              },
              {
                "code" : "LA21266-4",
                "display" : "chr13"
              },
              {
                "code" : "LA21267-2",
                "display" : "chr14"
              },
              {
                "code" : "LA21268-0",
                "display" : "chr15"
              },
              {
                "code" : "LA21269-8",
                "display" : "chr16"
              },
              {
                "code" : "LA21270-6",
                "display" : "chr17"
              },
              {
                "code" : "LA21271-4",
                "display" : "chr18"
              },
              {
                "code" : "LA21272-2",
                "display" : "chr19"
              },
              {
                "code" : "LA21273-0",
                "display" : "chr20"
              },
              {
                "code" : "LA21274-8",
                "display" : "chr21"
              },
              {
                "code" : "LA21275-5",
                "display" : "chr22"
              },
              {
                "code" : "LA21276-3",
                "display" : "chrX"
              },
              {
                "code" : "LA21277-1",
                "display" : "chrY"
              }
            ]
          },
          {
            "system" : "https://github.com/siric-osiris/OSIRIS",
            "concept" : [
              {
                "code" : "O19-1",
                "display" : "MT"
              },
              {
                "code" : "O19-2",
                "display" : "viral"
              },
              {
                "code" : "O19-3",
                "display" : "bacterial"
              }
            ]
          },
          {
            "system" : "http://terminology.hl7.org/CodeSystem/umls",
            "concept" : [
              {
                "code" : "C0439673",
                "display" : "Unknown"
              }
            ]
          }
        ]
      }
    }