FHIR Osiris Implementation Guide
1.1.0 - trial-implementation

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## : Chromosome Value Set - XML Representation

Draft as of 2025-04-03

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    <ValueSet xmlns="http://hl7.org/fhir">
      <id value="Chromosome"/>
      <text>
        <status value="generated"/>
        <div xmlns="http://www.w3.org/1999/xhtml"><p class="res-header-id"><b>Generated Narrative: ValueSet Chromosome</b></p><a name="Chromosome"> </a><a name="hcChromosome"> </a><a name="Chromosome-en-US"> </a><p>Ce jeu de valeur (ValueSet) inclut les codes selon les règles suivantes :</p><ul><li>Include ces codes sont définis dans <a href="http://loinc.org"><code>http://loinc.org</code></a><table class="none"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href="https://loinc.org/LA21254-0/">LA21254-0</a></td><td>chr1</td></tr><tr><td><a href="https://loinc.org/LA21255-7/">LA21255-7</a></td><td>chr2</td></tr><tr><td><a href="https://loinc.org/LA21256-5/">LA21256-5</a></td><td>chr3</td></tr><tr><td><a href="https://loinc.org/LA21257-3/">LA21257-3</a></td><td>chr4</td></tr><tr><td><a href="https://loinc.org/LA21258-1/">LA21258-1</a></td><td>chr5</td></tr><tr><td><a href="https://loinc.org/LA21259-9/">LA21259-9</a></td><td>chr6</td></tr><tr><td><a href="https://loinc.org/LA21260-7/">LA21260-7</a></td><td>chr7</td></tr><tr><td><a href="https://loinc.org/LA21261-5/">LA21261-5</a></td><td>chr8</td></tr><tr><td><a href="https://loinc.org/LA21262-3/">LA21262-3</a></td><td>chr9</td></tr><tr><td><a href="https://loinc.org/LA21263-1/">LA21263-1</a></td><td>chr10</td></tr><tr><td><a href="https://loinc.org/LA21264-9/">LA21264-9</a></td><td>chr11</td></tr><tr><td><a href="https://loinc.org/LA21265-6/">LA21265-6</a></td><td>chr12</td></tr><tr><td><a href="https://loinc.org/LA21266-4/">LA21266-4</a></td><td>chr13</td></tr><tr><td><a href="https://loinc.org/LA21267-2/">LA21267-2</a></td><td>chr14</td></tr><tr><td><a href="https://loinc.org/LA21268-0/">LA21268-0</a></td><td>chr15</td></tr><tr><td><a href="https://loinc.org/LA21269-8/">LA21269-8</a></td><td>chr16</td></tr><tr><td><a href="https://loinc.org/LA21270-6/">LA21270-6</a></td><td>chr17</td></tr><tr><td><a href="https://loinc.org/LA21271-4/">LA21271-4</a></td><td>chr18</td></tr><tr><td><a href="https://loinc.org/LA21272-2/">LA21272-2</a></td><td>chr19</td></tr><tr><td><a href="https://loinc.org/LA21273-0/">LA21273-0</a></td><td>chr20</td></tr><tr><td><a href="https://loinc.org/LA21274-8/">LA21274-8</a></td><td>chr21</td></tr><tr><td><a href="https://loinc.org/LA21275-5/">LA21275-5</a></td><td>chr22</td></tr><tr><td><a href="https://loinc.org/LA21276-3/">LA21276-3</a></td><td>chrX</td></tr><tr><td><a href="https://loinc.org/LA21277-1/">LA21277-1</a></td><td>chrY</td></tr></table></li><li>Include ces codes sont définis dans <code>https://github.com/siric-osiris/OSIRIS</code><table class="none"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>Display</b></td></tr><tr><td>O19-1</td><td>MT</td></tr><tr><td>O19-2</td><td>viral</td></tr><tr><td>O19-3</td><td>bacterial</td></tr></table></li><li>Include ces codes sont définis dans <a href="http://terminology.hl7.org/6.2.0/CodeSystem-umls.html"><code>http://terminology.hl7.org/CodeSystem/umls</code></a><table class="none"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>Display</b></td></tr><tr><td>C0439673</td><td>Unknown</td></tr></table></li></ul></div>
      </text>
      <url value="https://ig-osiris.cancer.fr/ig/osiris/ValueSet/Chromosome"/>
      <version value="1.1.0"/>
      <name value="Chromosome"/>
      <title value="Chromosome Value Set"/>
      <status value="draft"/>
      <date value="2025-04-03T14:14:07+02:00"/>
      <publisher value="institutcancer"/>
      <contact>
        <name value="institutcancer"/>
        <telecom>
          <system value="url"/>
          <value value="http://cancer.fr"/>
        </telecom>
        <telecom>
          <system value="email"/>
          <value value="osiris@institutcancer.fr"/>
        </telecom>
      </contact>
      <contact>
        <name value="Aurélien JOBARD"/>
        <telecom>
          <system value="email"/>
          <value value="osiris@institutcancer.fr"/>
        </telecom>
      </contact>
      <description value="Chromosome"/>
      <compose>
        <include>
          <system value="http://loinc.org"/>
          <concept>
            <code value="LA21254-0"/>
            <display value="chr1"/>
          </concept>
          <concept>
            <code value="LA21255-7"/>
            <display value="chr2"/>
          </concept>
          <concept>
            <code value="LA21256-5"/>
            <display value="chr3"/>
          </concept>
          <concept>
            <code value="LA21257-3"/>
            <display value="chr4"/>
          </concept>
          <concept>
            <code value="LA21258-1"/>
            <display value="chr5"/>
          </concept>
          <concept>
            <code value="LA21259-9"/>
            <display value="chr6"/>
          </concept>
          <concept>
            <code value="LA21260-7"/>
            <display value="chr7"/>
          </concept>
          <concept>
            <code value="LA21261-5"/>
            <display value="chr8"/>
          </concept>
          <concept>
            <code value="LA21262-3"/>
            <display value="chr9"/>
          </concept>
          <concept>
            <code value="LA21263-1"/>
            <display value="chr10"/>
          </concept>
          <concept>
            <code value="LA21264-9"/>
            <display value="chr11"/>
          </concept>
          <concept>
            <code value="LA21265-6"/>
            <display value="chr12"/>
          </concept>
          <concept>
            <code value="LA21266-4"/>
            <display value="chr13"/>
          </concept>
          <concept>
            <code value="LA21267-2"/>
            <display value="chr14"/>
          </concept>
          <concept>
            <code value="LA21268-0"/>
            <display value="chr15"/>
          </concept>
          <concept>
            <code value="LA21269-8"/>
            <display value="chr16"/>
          </concept>
          <concept>
            <code value="LA21270-6"/>
            <display value="chr17"/>
          </concept>
          <concept>
            <code value="LA21271-4"/>
            <display value="chr18"/>
          </concept>
          <concept>
            <code value="LA21272-2"/>
            <display value="chr19"/>
          </concept>
          <concept>
            <code value="LA21273-0"/>
            <display value="chr20"/>
          </concept>
          <concept>
            <code value="LA21274-8"/>
            <display value="chr21"/>
          </concept>
          <concept>
            <code value="LA21275-5"/>
            <display value="chr22"/>
          </concept>
          <concept>
            <code value="LA21276-3"/>
            <display value="chrX"/>
          </concept>
          <concept>
            <code value="LA21277-1"/>
            <display value="chrY"/>
          </concept>
        </include>
        <include>
          <system value="https://github.com/siric-osiris/OSIRIS"/>
          <concept>
            <code value="O19-1"/>
            <display value="MT"/>
          </concept>
          <concept>
            <code value="O19-2"/>
            <display value="viral"/>
          </concept>
          <concept>
            <code value="O19-3"/>
            <display value="bacterial"/>
          </concept>
        </include>
        <include>
          <system value="http://terminology.hl7.org/CodeSystem/umls"/>
          <concept>
            <code value="C0439673"/>
            <display value="Unknown"/>
          </concept>
        </include>
      </compose>
    </ValueSet>