This page is part of the OSIRIS FHIR Implementation Guide (v1.1.0: Release) based on FHIR (HL7® FHIR® Standard) R4. This is the current published version in its permanent home (it will always be available at this URL). For a full list of available versions, see the Directory of published versions

• Narrative Content
• XML
• JSON
• TTL

: Biological Sample Nature Value Set - JSON Representation

Draft as of 2025-04-03

Raw json | Download

{
  "resourceType" : "ValueSet",
  "id" : "BiologicalSampleNature",
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: ValueSet BiologicalSampleNature</b></p><a name=\"BiologicalSampleNature\"> </a><a name=\"hcBiologicalSampleNature\"> </a><a name=\"BiologicalSampleNature-en-US\"> </a><ul><li>Include ces codes sont définis dans <a href=\"http://terminology.hl7.org/6.2.0/CodeSystem-umls.html\"><code>http://terminology.hl7.org/CodeSystem/umls</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td>C0005767</td><td>Blood</td></tr><tr><td>C0032105</td><td>Plasma</td></tr><tr><td>C0033684</td><td>Protein</td></tr><tr><td>C0035668</td><td>RNA</td></tr><tr><td>C0012854</td><td>DNA</td></tr><tr><td>C1321301</td><td>Peripheral Blood Mononuclear Cell</td></tr><tr><td>C0085983</td><td>Tumor Cell Line</td></tr><tr><td>C1548793</td><td>Frozen Specimen</td></tr><tr><td>C1519524</td><td>Paraffin Embedded Tissue (FFPE)</td></tr><tr><td>C0042036</td><td>Urine</td></tr><tr><td>C0439673</td><td>Unknown</td></tr><tr><td>C0036087</td><td>Saliva</td></tr><tr><td>C0229671</td><td>Serum</td></tr><tr><td>C3827014</td><td>Circulating Tumor-Derived DNA</td></tr><tr><td>C0522537</td><td>Xenograft</td></tr><tr><td>C0007806</td><td>Cerebrospinal FLuid</td></tr><tr><td>C0225778</td><td> Pleural Fluid</td></tr><tr><td>C2827484</td><td>Fixed Slide</td></tr></table></li></ul></div>"
  },
  "url" : "https://ig-osiris.cancer.fr/ig/osiris/ValueSet/BiologicalSampleNature",
  "version" : "1.1.0",
  "name" : "BiologicalSampleNature",
  "title" : "Biological Sample Nature Value Set",
  "status" : "draft",
  "date" : "2025-04-03T14:14:07+02:00",
  "publisher" : "institutcancer",
  "contact" : [
    {
      "name" : "institutcancer",
      "telecom" : [
        {
          "system" : "url",
          "value" : "http://cancer.fr"
        },
        {
          "system" : "email",
          "value" : "osiris@institutcancer.fr"
        }
      ]
    },
    {
      "name" : "Aurélien JOBARD",
      "telecom" : [
        {
          "system" : "email",
          "value" : "osiris@institutcancer.fr"
        }
      ]
    }
  ],
  "description" : "Biological sample nature",
  "compose" : {
    "include" : [
      {
        "system" : "http://terminology.hl7.org/CodeSystem/umls",
        "concept" : [
          {
            "code" : "C0005767",
            "display" : "Blood"
          },
          {
            "code" : "C0032105",
            "display" : "Plasma"
          },
          {
            "code" : "C0033684",
            "display" : "Protein"
          },
          {
            "code" : "C0035668",
            "display" : "RNA"
          },
          {
            "code" : "C0012854",
            "display" : "DNA"
          },
          {
            "code" : "C1321301",
            "display" : "Peripheral Blood Mononuclear Cell"
          },
          {
            "code" : "C0085983",
            "display" : "Tumor Cell Line"
          },
          {
            "code" : "C1548793",
            "display" : "Frozen Specimen"
          },
          {
            "code" : "C1519524",
            "display" : "Paraffin Embedded Tissue (FFPE)"
          },
          {
            "code" : "C0042036",
            "display" : "Urine"
          },
          {
            "code" : "C0439673",
            "display" : "Unknown"
          },
          {
            "code" : "C0036087",
            "display" : "Saliva"
          },
          {
            "code" : "C0229671",
            "display" : "Serum"
          },
          {
            "code" : "C3827014",
            "display" : "Circulating Tumor-Derived DNA"
          },
          {
            "code" : "C0522537",
            "display" : "Xenograft"
          },
          {
            "code" : "C0007806",
            "display" : "Cerebrospinal FLuid"
          },
          {
            "code" : "C0225778",
            "display" : " Pleural Fluid"
          },
          {
            "code" : "C2827484",
            "display" : "Fixed Slide"
          }
        ]
      }
    ]
  }
}